Can Guanidine Isothiocyanate be used in tissue homogenization?
Jun 27, 2025| Can Guanidine Isothiocyanate be used in tissue homogenization?
As a supplier of Guanidine Isothiocyanate, I often encounter inquiries from researchers and scientists about the potential applications of this chemical, especially in the context of tissue homogenization. In this blog post, I aim to explore the viability of using Guanidine Isothiocyanate in tissue homogenization, providing insights based on scientific knowledge and practical experience.
Understanding Guanidine Isothiocyanate
Guanidine Isothiocyanate (GITC) is a strong protein denaturant and chaotropic agent. It is widely used in molecular biology and biochemistry due to its ability to disrupt protein structures and inhibit ribonucleases (RNases). This property makes it particularly useful in RNA isolation procedures, as it helps to preserve the integrity of RNA by inactivating RNases that could otherwise degrade the RNA molecules.
The chemical structure of GITC consists of a guanidine group and an isothiocyanate group. The guanidine group interacts with proteins, disrupting the hydrogen bonds and hydrophobic interactions that maintain the protein's native structure. The isothiocyanate group can react with certain amino acid residues, further contributing to protein denaturation.


Tissue Homogenization: A Brief Overview
Tissue homogenization is a crucial step in many biological and biochemical studies. It involves the disruption of tissue samples to release cellular components, such as proteins, nucleic acids, and organelles, for further analysis. There are several methods for tissue homogenization, including mechanical, chemical, and enzymatic approaches.
Mechanical homogenization methods, such as using a homogenizer or a blender, physically break down the tissue by applying shear forces. Chemical homogenization involves the use of detergents, chaotropic agents, or other chemicals to disrupt the cell membranes and solubilize the cellular components. Enzymatic homogenization uses enzymes to digest the extracellular matrix and cell membranes.
Can Guanidine Isothiocyanate be Used in Tissue Homogenization?
The answer is yes, Guanidine Isothiocyanate can be used in tissue homogenization. Its strong protein denaturing and chaotropic properties make it an effective agent for disrupting cell membranes and releasing cellular components. Here are some reasons why GITC is suitable for tissue homogenization:
- Protein Denaturation: GITC can rapidly denature proteins, which helps to break down the tissue structure and release the cellular contents. This is particularly important when isolating proteins or nucleic acids from tissues, as it prevents the degradation of these molecules by proteases and nucleases.
- RNase Inhibition: As mentioned earlier, GITC is a potent inhibitor of RNases. This is crucial when isolating RNA from tissues, as RNases are ubiquitous and can quickly degrade RNA. By using GITC in the homogenization process, the integrity of the RNA can be preserved.
- Solubilization of Cellular Components: GITC can solubilize a wide range of cellular components, including proteins, nucleic acids, and lipids. This allows for the efficient extraction of these molecules from the tissue samples.
How to Use Guanidine Isothiocyanate in Tissue Homogenization
When using GITC in tissue homogenization, it is important to follow the appropriate protocols and safety precautions. Here is a general procedure for using GITC in tissue homogenization:
- Prepare the GITC Solution: Prepare a solution of GITC in an appropriate buffer, such as Tris-HCl or phosphate buffer. The concentration of GITC can vary depending on the type of tissue and the specific application, but typically ranges from 3 to 6 M.
- Add the Tissue Sample: Add the tissue sample to the GITC solution. The ratio of tissue to GITC solution can also vary, but a common ratio is 100 mg of tissue per 1 mL of GITC solution.
- Homogenize the Tissue: Use a mechanical homogenizer or a blender to homogenize the tissue in the GITC solution. This step should be carried out on ice to prevent overheating and degradation of the cellular components.
- Centrifuge the Homogenate: After homogenization, centrifuge the homogenate at a high speed to separate the insoluble debris from the soluble cellular components. The supernatant can then be used for further analysis.
Advantages and Disadvantages of Using Guanidine Isothiocyanate in Tissue Homogenization
Like any other method, using GITC in tissue homogenization has its advantages and disadvantages. Here are some of the key points to consider:
Advantages
- Efficient Protein Denaturation: GITC can rapidly denature proteins, which helps to break down the tissue structure and release the cellular contents.
- RNase Inhibition: GITC is a potent inhibitor of RNases, which helps to preserve the integrity of RNA during the homogenization process.
- Solubilization of Cellular Components: GITC can solubilize a wide range of cellular components, including proteins, nucleic acids, and lipids.
Disadvantages
- Toxicity: GITC is a toxic chemical and should be handled with care. It can cause irritation to the skin, eyes, and respiratory system, and can be harmful if ingested or inhaled.
- Compatibility with Downstream Applications: GITC can interfere with some downstream applications, such as protein purification or enzyme assays. Therefore, it may be necessary to remove the GITC from the sample before further analysis.
- Cost: GITC can be relatively expensive, especially when used in large quantities.
Other Applications of Guanidine Isothiocyanate
In addition to tissue homogenization, Guanidine Isothiocyanate has several other applications in molecular biology and biochemistry. Here are some examples:
- RNA Isolation: GITC is a key component in many RNA isolation kits. It helps to lyse cells, denature proteins, and inhibit RNases, allowing for the efficient isolation of high-quality RNA.
- Protein Purification: GITC can be used to denature proteins and solubilize them for purification. It can also be used to refold denatured proteins.
- DNA Extraction: GITC can be used in DNA extraction procedures to disrupt the cell membranes and release the DNA.
Related Products
As a supplier of Guanidine Isothiocyanate, we also offer other related products that may be of interest to researchers. These include 6 Micron Superfine Dicyandiamide, Guanidine Nitrate, and Dicyandiamide Powder. These products have various applications in the chemical, pharmaceutical, and agricultural industries.
Conclusion
In conclusion, Guanidine Isothiocyanate can be effectively used in tissue homogenization due to its strong protein denaturing and chaotropic properties. It helps to break down the tissue structure, release the cellular components, and preserve the integrity of RNA. However, it is important to handle GITC with care due to its toxicity and to consider its compatibility with downstream applications.
If you are interested in purchasing Guanidine Isothiocyanate or any of our other products, please feel free to contact us for more information. We are committed to providing high-quality chemicals and excellent customer service.
References
- Sambrook, J., & Russell, D. W. (2001). Molecular cloning: A laboratory manual. Cold Spring Harbor Laboratory Press.
- Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. D., Seidman, J. G., Smith, J. A., & Struhl, K. (Eds.). (1995). Current protocols in molecular biology. John Wiley & Sons.
- Walker, J. M. (Ed.). (2002). The protein protocols handbook. Humana Press.

